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Frequently Asked Questions
How many legume species are there in legumeSSRdb?
Currently there are 13 species of legumes in legumeSSRdb these species are listed as follows:
Glycine max
Cicer arietinum
Medicago truncatula
Trifolium pratense
Phaseolus vulgaris
Vigna unguiculata
Arachis Hypogaea
Arachis ipaensis
Cajanus cajan
Lupinus albus
Lupinus angustifolius
Vigna angularis
Vigna Radiata
How the microsatellites in legumeSSRdb predicted?
Simple sequence repeats in legumeSSRdb were predicted using an in-house perl script microSATminer.
What functionality legumeSSRdb provides?
On legumeSSRdb a user can search microsatellites based on genomic , genic, and non-genic region in the genome. User can also search based on motif type, repeat motif, chromosome location range, frequency of SSR. They can design custom markers for the selected repeats and run ePCR to check cross species tranferability.