Installation

The installation of pySeqRNA can be done in two ways:

1. Create a dedicated miniconda3 environment

   Download pySeqRNA 0.2 from:

   https://bioinfo.usu.edu/pyseqrna/download/pySeqRNA-0.2.tar.gz

   Download the Miniconda installer:

   https://docs.conda.io/en/latest/miniconda.html#linux-installers

   Extract the downloaded file:

   tar -xvzf pySeqRNA-0.2.tar.gz

   cd pySeqRNA-0.2

   Create and activate a conda environment

   conda env create -f environment.yml

   conda activate pyseqrna-0.2

   pip3 install .

2. Intall using system Python3 and installed external tools

   Download and install prerequisite from above and install

   Download pySeqRNA 0.2 from:

   https://bioinfo.usu.edu/pyseqrna/download/pySeqRNA-0.2.tar.gz

   Extract the downloaded file:

   tar -xvzf pySeqRNA-0.2.tar.gz

   cd pySeqRNA-0.2

   pip3 install .