FastQCFastQC Report
Thu 25 Jan 2024
SRR25792495_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR25792495_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14404817
Sequences flagged as poor quality0
Sequence length101
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCGCA7124204.94570670352841No Hit
CTCCCACAACCCCGCACACACAACCCCTACCCGGTTACCCATGCGTGCGG3075362.1349524954048356No Hit
CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGT3027742.1018941094496375No Hit
CCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTG2208611.533244053013655No Hit
CCCACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCG2179521.5130494195101543No Hit
CTCCTCACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTTC2155231.496187004666564No Hit
CTCCCCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCTCACAGTTA2009001.3946723516168238No Hit
CTTGGTCTTTCGGCGGGCAAGGTTCTCACTTGCCTTGTCGCTACTCATGC1665711.1563562383333297No Hit
CTTCGCCACCGGTGTTCCTCCTGATATCTGCGCATTCCACCGCTACACCA1440951.0003250995830075No Hit
CCCGACTTTCGTCCCTGCTTGACTTGTAAGTCTCGCAGTCAAGCTCCCTT1306130.9067314079727636No Hit
CCCCGCTACATTATCGGCGCACAATCACTTGACCAGTGAGCTATTACGCA1206560.8376086971462393No Hit
CCCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCTCACAGTTAAGC1030000.7150385874391879No Hit
CCCACAACCCCGCACACACAACCCCTACCCGGTTACCCATGCGTGCGGTT1015330.7048544941598355No Hit
CTCACCCGTTCGCCACTCGAGTATCTCCGAAGAGACCTTTCCGTTCGACT1013340.7034730118404142No Hit
CCCCGCGTTCCCTCCCGCACCCTATATATTCAGATGCGGGTAGCACGACA944840.6559194747146041No Hit
CCACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCGC907020.6296643685233905No Hit
CTTTTATCCGTTGAGCGACACCCCTTCCACTCGGGGGTGCCGGATCACTA860020.5970363941450975No Hit
CTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTA824100.5721002911734318No Hit
CTCACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTTCACG816160.5665882461401627No Hit
CTCTCGTACTAGGGACAGGTTTCCTCAAGTTTCTGACGCGCGCGGCGGAT785650.5454078312831048No Hit
CTGCATTCTCACTCCCCCACCCTCCACCACCGGTCACCCGGTGGCTTCGC778520.5404580981486957No Hit
CTTCGCTTGACTACTACCAGCGAAGTTCCCACGCAGCCCCAGAACTCCAC776920.5393473585953921No Hit
CTTTTCCACTTAGCACACGCTTGGGGGCCTTAGCCGGCGATCTGGGCTGT768050.5331896961967653No Hit
CTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCGCACCC761190.5284274003619761No Hit
CTCCCCTACCCACACCCACCACAAGGTGGATGTGCCGCGGCTTCGGCGGT745540.5175629791062254No Hit
CCTCCCACAACCCCGCACACACAACCCCTACCCGGTTACCCATGCGTGCG739950.5136823327918709No Hit
CTCGTACTAGGGACAGGTTTCCTCAAGTTTCTGACGCGCGCGGCGGATAG736010.5109471366418608No Hit
CACCCGTTCGCCACTCGAGTATCTCCGAAGAGACCTTTCCGTTCGACTTG716650.4975071880468873No Hit
CTCTCAGGTCGGCTACCCGTCGTCGCCTTGGTAGGCCGTCACCCCACCAA706320.49033597580587107No Hit
CCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGG682110.473529097939946No Hit
CGCTACATTATCGGCGCACAATCACTTGACCAGTGAGCTATTACGCACTC645650.4482181203690404No Hit
CCCCGGGGTACCTTTTATCCGTTGAGCGACACCCCTTCCACTCGGGGGTG617730.42883571516389274No Hit
CCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTC603170.41872798522883004No Hit
CTCCGCTTCGGGTCCAGAACACGCCACTATTCACACGCGCGTATGCGCGT597490.41478485981460234No Hit
CCGCTACATTATCGGCGCACAATCACTTGACCAGTGAGCTATTACGCACT594080.412417596141624No Hit
CCCACCAACAAGCTGATAGGCCGCGGGCTCATCCCACACCGCTAAAGCGC587660.40796075368399337No Hit
CCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGT579770.402483419261765No Hit
CCCGCGTTCCCTCCCGCACCCTATATATTCAGATGCGGGTAGCACGACAT562850.3907373484855795No Hit
CCCCAGTTAAACTACCCGCCAGGCACTGTCCCTAAACCCGATTCAGGGTT509640.35379831621602686No Hit
CTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCTCACAGTTAAGCCG493820.3428158788827376No Hit
CTCCCACCTATCCTACACAAACCGTACCGAACATCAATACCAAGTTGTAG492500.3418995187512622No Hit
CTCCCCAGGCGGGGTACTTAATGCGTTAGCTACGGCACGGATCCCAAGGA481460.33423541583346733No Hit
CTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCGCCACCGGTGTTCCTC475510.3301048531196196No Hit
CTCTACCTGACCACCTGTGTCGGTTTGGGGTACGGGCCGTGTGTGTGCTC472000.3276681682245599No Hit
CCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCTCACGAGTCCCCACCA442620.3072722131770227No Hit
CCTGGACATAAGGGGCATGATGACTTGACGTCATCCCCACCTTCCTCCGA435170.3021003321319528No Hit
CCTCACGGTACTAATCCGCTATCGGTCATCGAGGAGTATTTAGGCTTACC431890.2998233160476804No Hit
CTCCCTTGTGCATTTACACTCGCCACCTGATTGCCGTCCAGGTTGAGGGA428630.2975601842078244No Hit
CCTCACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTTCAC428160.2972339044640414No Hit
CGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGGGT424880.2949568883797691No Hit
CCACCAACAAGCTGATAGGCCGCGGGCTCATCCCACACCGCTAAAGCGCT422090.29302003628369594No Hit
CACGGTTTCAGGTACTCTTTCACTCCCCTCCCGGGGTACTTTTCACCATT417690.28996550251211106No Hit
CTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCGCCACCGGTGTTC414540.2877787340165446No Hit
CCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTG398790.27684489153871233No Hit
CCCGGGGTACCTTTTATCCGTTGAGCGACACCCCTTCCACTCGGGGGTGC389440.2703540072740945No Hit
CCTTGGTCTTTCGGCGGGCAAGGTTCTCACTTGCCTTGTCGCTACTCATG388090.2694168207759946No Hit
CTCAGGTCGGCTACCCGTCGTCGCCTTGGTAGGCCGTCACCCCACCAACA384920.26721616803601184No Hit
CCCACCATTACGTGCTGGCAACATGAGACAAGGGTTGCGCTCGTTGCGGG361890.25122846059064824No Hit
GTCCTCTCGTACTAGGGACAGGTTTCCTCAAGTTTCTGACGCGCGCGGCG359950.24988168888226767No Hit
CACCCCTTCGCTTGACTACTACCAGCGAAGTTCCCACGCAGCCCCAGAAC354660.24620930623415765No Hit
CCCATTCGGAAATCCTCGGATCCACGCTCGGTTGACAGCTCCCCGAGGCA352360.24461261812628374No Hit
CCCAGTTAAACTACCCGCCAGGCACTGTCCCTAAACCCGATTCAGGGTTC348290.2417871743875677No Hit
CGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAAA336950.2339148078035285No Hit
GTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGGGTA332650.2309296952540251No Hit
CCCGCTACATTATCGGCGCACAATCACTTGACCAGTGAGCTATTACGCAC332530.23084638978752733No Hit
CTCCCCACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCT328700.22818755698180687No Hit
CTCCGACTTCACGGGGTCGAGTTGCAGACCCCGATCCGAACTGAGACCGG327550.2273892129278699No Hit
CCTGCATTCTCACTCCCCCACCCTCCACCACCGGTCACCCGGTGGCTTCG325220.22577169845337153No Hit
CTCCCCTACAGTACTCTAGTCTGCCCGTATCGCCCGCACGCTCACAGTTA324620.22535517112088269No Hit
CCCCATTCGGAAATCCTCGGATCCACGCTCGGTTGACAGCTCCCCGAGGC321980.22352245085793176No Hit
CTTTCGGCGGGCAAGGTTCTCACTTGCCTTGTCGCTACTCATGCCTGCAT320060.22218956339396745No Hit
CTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCG317290.2202665955423106No Hit
CCGACTTTCGTCCCTGCTTGACTTGTAAGTCTCGCAGTCAAGCTCCCTTG316080.21942659875512477No Hit
CTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCGTCACCCCACCAA314930.2186282547011878No Hit
GCTCCTCACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTT313110.217364788459305No Hit
CACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTTCACGAT295110.20486896848463956No Hit
CCCCTACCCACACCCACCACAAGGTGGATGTGCCGCGGCTTCGGCGGTGT291120.2020990617235887No Hit
CTGGACATAAGGGGCATGATGACTTGACGTCATCCCCACCTTCCTCCGAG290510.20167559226889173No Hit
CCTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCGCACC290490.20166170802447542No Hit
CCCGTCGTCGCCTTGGTAGGCCGTCACCCCACCAACAAGCTGATAGGCCG290060.20136319676952508No Hit
CCGGGAACGTATTCACCGCAGCGTTGCTGATCTGCGATTACTAGCGACTC287260.1994194025512438No Hit
CTCGCTTTCGCTGCGGCTACCCCACACGGGTTAACCTTGCGACATGTCCC283390.1967328012566907No Hit
CTTCCTCCGAGTTGACCCCGGCAGTCTCTCACGAGTCCCCACCATTACGT281460.19539297167051828No Hit
CACCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCGTCACCCCA280680.19485148613828276No Hit
CTCAAGTTTCTGACGCGCGCGGCGGATAGAGACCGAACTGTCTCACGACG274260.1903946436806521No Hit
CCCCACGCGGCGTCGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCC268440.1863543285555103No Hit
CCCCAGGCGGGGTACTTAATGCGTTAGCTACGGCACGGATCCCAAGGAAG265320.1841883864265683No Hit
CCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCAC265000.18396623851590757No Hit
GACCGCCCCAGTTAAACTACCCGCCAGGCACTGTCCCTAAACCCGATTCA258930.17975237033556205No Hit
CTCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTG254510.17668395231956088No Hit
CCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTATCTCG253460.1759550294877054No Hit
CCCCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCTCACAGTTAAG252590.17535106485559657No Hit
CCCACCTATCCTACACAAACCGTACCGAACATCAATACCAAGTTGTAGTG245040.17010976258844526No Hit
CTCACGGTACTAATCCGCTATCGGTCATCGAGGAGTATTTAGGCTTACCG243330.16892265969085202No Hit
CTGGCGGTCTGGGTTGTTTCCCTTTCGACGTACGGAGCTTATCCCCCGCC237220.16468102302167395No Hit
CCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGGG231750.16088368217381727No Hit
TCCCACAACCCCGCACACACAACCCCTACCCGGTTACCCATGCGTGCGGT230930.16031442815274918No Hit
CCAACATCTCACGACACGAGCTGACGACAGCCATGCACCACCTGCACACA229540.15934947316581669No Hit
CGGGAACGTATTCACCGCAGCGTTGCTGATCTGCGATTACTAGCGACTCC229000.15897459856657672No Hit
CACCGGTGTTCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATT228640.1587246821670834No Hit
CTTTTCCACTTAACACACGCTTGGGGGCCTTAGCCGGCGATCTGGGCTGT228570.15867608731162638No Hit
CACCCCACCAACAAGCTGATAGGCCGCGGGCTCATCCCACACCGCTAAAG227070.15763476898040427No Hit
CACCAACAAGCTGATAGGCCGCGGGCTCATCCCACACCGCTAAAGCGCTT223800.15536469501834005No Hit
CTCTCCTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCG219750.15255313552404032No Hit
CTTTCGCCACCGGTGTTCCTCCTGATATCTGCGCATTCCACCGCTACACC217350.15088702619408492No Hit
CCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTGG214710.149054305931134No Hit
CTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCGTCACCCCACCAACA214620.14899182683126067No Hit
CCTCCTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCGC213000.14786720303354078No Hit
CCACCATTACGTGCTGGCAACATGAGACAAGGGTTGCGCTCGTTGCGGGA212860.14777001332262674No Hit
CCCACTTAGCACACGCTTGGGGGCCTTAGCCGGCGATCTGGGCTGTTTCC212540.14754786541196602No Hit
CCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCTCACGAGTCCCCACCAT212380.14743679145663566No Hit
CGCTGATTCGTCACGGGCGCCCACACACGGGTACGGGAATATCAACCCGT212030.14719381717935048No Hit
CGCTCCTCACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGT211310.14669398438036388No Hit
CTTCCTCCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCGC207580.14410457279672487No Hit
GTTTCCCTTTCGACGTACGGAGCTTATCCCCCGCCGTCTCACTGCCACGC206920.14364639273098714No Hit
GTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGAG201310.1397518621722164No Hit
GTCCCGACTCACCCTGGGCGGACTGGCCTGGCCCAGGAACCCTTGGTCTT200670.13930756635089497No Hit
CCTGCAGTACTCTAGTCTGCCCGTATCGCCCGCACGCTCACAGTTAAGCC197720.13725964029949148No Hit
CGCCACCGGTGTTCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGA197240.1369264184335004No Hit
CTACATTATCGGCGCACAATCACTTGACCAGTGAGCTATTACGCACTCTT196830.13664179142296634No Hit
CTACGTATTACCGCGGCTGCTGGCACGTAGTTGGCCGGTGCTTCTTCTCC194090.13473964993793397No Hit
CCCGACTCACCCTGGGCGGACTGGCCTGGCCCAGGAACCCTTGGTCTTTC191450.13290692967498302No Hit
CCCCACCTTCCTCCAGTTGACCCCGGCAGTCTCTCACGAGTCCCCACCAT190650.13235155989833122No Hit
CTCCCTTCCTCCGAGTTGACCCCGGCAGTCTCTCACGAGTCCCCACCATT190450.13221271745416827No Hit
ATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCA189720.13170594253297352No Hit
CTTTCGTCCCTGCTTGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCA185700.12891520940529824No Hit
CTCATCCGTTCGCCACTCGAGTATCTCCGAAGAGACCTTTCCGTTCGACT178070.12361837016048173No Hit
CCACCGTTTACGGCGTGGACTACCAGGGTATCTAATCCTGTTCGCTCCCC177270.12306300038382995No Hit
GCTCCCTTGTGCATTTACACTCGCCACCTGATTGCCGTCCAGGTTGAGGG176540.12255622546263518No Hit
CTTTTCTTGGCAGCAGAGGATCACCGAATTCGCCTCAACCGGCTATGCGT175250.12166069169778417No Hit
CTCCTCACGGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTTC173980.12077904217734942No Hit
CCTACGGGTACTGAGATGTTTCACTTCCCCGCGTTCCCTCCCGCACCCTA172370.11966136050183768No Hit
CTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTGGCCGGACACCC169930.1179674826830497No Hit
CTCACGACACGAGCTGACGACAGCCATGCACCACCTGCACACAGGCCACA166550.11562104537669586No Hit
CAACGCTCCCCTACCCACACCCACCACAAGGTGGATGTGCCGCGGCTTCG166400.11551691354357366No Hit
CCCAGGCGGGGTACTTAATGCGTTAGCTACGGCACGGATCCCAAGGAAGG165020.1145589006788493No Hit
CTCCCTTCCTCCCACAACCCCGCACACACAACCCCTACCCGGTTACCCAT164300.11405906787986268No Hit
CCGTTCGCCACTCGAGTATCTCCGAAGAGACCTTTCCGTTCGACTTGCAT162890.1130802286485139No Hit
CTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTC162780.11300386530422428No Hit
CACCTATCCTACACAAACCGTACCGAACATCAATACCAAGTTGTAGTGAA162130.1125526273606947No Hit
ATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGGGTACTTA161890.11238601642769915No Hit
CGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACA160770.11160849874038664No Hit
CGGCCATTGTAGCATGTGTGAAGCCCTGGACATAAGGGGCATGATGACTT160380.11133775597426888No Hit
CTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAGTCCCAGTGTGG159980.11106007108594299No Hit
CAACATCTCACGACACGAGCTGACGACAGCCATGCACCACCTGCACACAG157650.10944255661144463No Hit
CCCCACCATTACGTGCTGGCAACATGAGACAAGGGTTGCGCTCGTTGCGG157410.10927594567844909No Hit
CACGCTTTCGCTCCTCAGCGTCAGTTACTGCCCAGAGACCCGCCTTCGCC152130.10561050515254723No Hit
CTTGTGCATTTACACTCGCCACCTGATTGCCGTCCAGGTTGAGGGAACCT152040.1055480260526739No Hit
CACCGTTTACGGCGTGGACTACCAGGGTATCTAATCCTGTTCGCTCCCCA150380.10439563376612143No Hit
CGCCACTCGAGTATCTCCGAAGAGACCTTTCCGTTCGACTTGCATGTGTT150160.10424290707754219No Hit
CTCCCACTGGTTTCTGCGACCGGATCCCGCTCCCACCGCAAGGGTGTTCA147950.1027086980695416No Hit
CCACAACCCCGCACACACAACCCCTACCCGGTTACCCATGCGTGCGGTTT146640.10179928006027429No Hit
CCCCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCG145610.1010842414728351No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)