FastQCFastQC Report
Thu 25 Jan 2024
SRR25787974_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR25787974_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11072537
Sequences flagged as poor quality0
Sequence length101
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCA3506363.1667177991818862No Hit
CGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACA3125092.8223793697867072No Hit
ATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGA2983812.694784402165466No Hit
GCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGT2336082.1097965172751287No Hit
GTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGC2114781.9099326559035208No Hit
CGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATT1675481.513185279940812No Hit
CCGCTATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGG1571061.418879882722451No Hit
CCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTA1256751.1350153989099336No Hit
CGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTACC873240.7886539462455624No Hit
GGGCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGC756360.6830954820923154No Hit
GAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTC723820.6537074565657356No Hit
GGCCGGTTAGCACCAGTTCCCTACACCCATTACTGAGCTTCCAGGTCTGA641600.5794516649616976No Hit
ATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGC641440.5793071632996124No Hit
CGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTACCGGGCTCTCAC571140.5158167455209226No Hit
CTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTACCGGGCTCTC539020.48680803685731644No Hit
GGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCT517700.46755319038446197No Hit
CTCGGTTACCAAGCGTGCACTCCTGGGGTTGCGTGGGTGGCCTCGGCGAT502760.45406034768725545No Hit
GAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCAC482070.4353744765088615No Hit
ATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCA463250.41837746850608853No Hit
CCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTAC452690.4088403588084646No Hit
CCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTACT402230.36326814712834105No Hit
CGGCCGGTTAGCACCAGTTCCCTACACCCATTACTGAGCTTCCAGGTCTG401370.362491450694633No Hit
CATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGG400940.36210310247777905No Hit
CTCAAGGCTTCTCCGTGCGCAGTTCGCTATGCCTCTGCTCGGATCTCCCG392880.35482383125023653No Hit
CCGGGCTCTCACCGTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACC390560.35272855715000095No Hit
CACGGGCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTT369800.33397946649444477No Hit
GGCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCG362720.32758526794717413No Hit
CCACGGGCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTT336630.30402246567340435No Hit
GGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAG310250.2801977541371051No Hit
GCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTACCG305240.27567304584306196No Hit
CGGGCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCG301600.27238563303062346No Hit
CGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTACTC294810.2662533437458823No Hit
GTGCGCAGTTCGCTATGCCTCTGCTCGGATCTCCCGGTCACGCGAACTAG291290.2630743071800076No Hit
GGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTACTCGGGAATTGATA286580.2588205395023742No Hit
ATCCGCTATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGC284420.2568697670642238No Hit
CCTGGGGTTGCGTGGGTGGCCTCGGCGATCTTGCGACGCTTCTAGCTGTA270940.2446955020335448No Hit
GTCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGT263790.2382380840091119No Hit
GCCGGTTAGCACCAGTTCCCTACACCCATTACTGAGCTTCCAGGTCTGAC258760.2336953130073081No Hit
GTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACCACGACACTTTCTG257630.23267477001883127No Hit
CTCCTGGGGTTGCGTGGGTGGCCTCGGCGATCTTGCGACGCTTCTAGCTG246670.22277640616599428No Hit
CTTCGCTTGACTACTACCAGCGAAGTTCCCACGCAGCCCCAGAACTCCAC244920.2211959192369373No Hit
CTCTGCTCGGATCTCCCGGTCACGCGAACTAGCCGAGATGACGATCCCAG232710.2101686361490596No Hit
CGGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTACTCGGGAATTGAT231240.20884102712865174No Hit
CTCCGTGCGCAGTTCGCTATGCCTCTGCTCGGATCTCCCGGTCACGCGAA223790.20211266848780907No Hit
GTCGGTTTGGGGTACGGGCCGTGTGTGTGCTCGCTAGAGGCTTTTCTTGG223790.20211266848780907No Hit
CCCGTGTTCTGCGGGGGGCCTTATCCCACCAAGTGGGTGAGAAACCTGAT215630.1947430837214633No Hit
CTCACCGTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACCACGACAC209130.18887270369925158No Hit
CCGCTAACCACGACACTTTCTGACTGCCTCTCAGCCGGGTAGCGCTGAGA208190.18802375643450095No Hit
GCCACTTCCGCTAACCACGACACTTTCTGACTGCCTCTCAGCCGGGTAGC207850.18771669040256989No Hit
CCCGGGTCCTACGGCATTCCCTCAAGGCTTCTCCGTGCGCAGTTCGCTAT190660.17219179308229No Hit
ACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTAC190530.17207438548184575No Hit
CGCTATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGA184370.16651107149156513No Hit
GCCGTGTGTGTGCTCGCTAGAGGCTTTTCTTGGCAGCAGAGGATCACCGA181400.16382875938910837No Hit
CACCGTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACCACGACACTT175600.15859057413851946No Hit
CTATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATT169980.15351495325777642No Hit
TCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGAT163650.14779810625153025No Hit
CTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCTGC163000.14721106824930907No Hit
TATCGGTCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTC162850.1470755979411042No Hit
GTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTACTCGGGAAT161220.14560348725861108No Hit
TCATCGAGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCG161210.14559445590473077No Hit
GTCACCTCTCAGGATTAGTGAGCGACGGATTTGCCTATCGCTCTCCCTAC159430.1439868749140328No Hit
GTGCACTCCTGGGGTTGCGTGGGTGGCCTCGGCGATCTTGCGACGCTTCT156400.14125037468829413No Hit
CCGGCGGATTCACAGCGGATTCCACGGGCCCGCTGCTACTCGGGAATTGA154810.13981438942132232No Hit
CCGGGTCCTACGGCATTCCCTCAAGGCTTCTCCGTGCGCAGTTCGCTATG148150.1337995077370254No Hit
CTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGTACCGG145620.131514575205303No Hit
CCCCGCTGCTACTCGGGAATTGATACTAGGCAGGTGCCGGGTTTTCGCGT141300.12761303032900229No Hit
GCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGGGCCCGCTG140260.12667376952544843No Hit
AGGAGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCC138540.12512037665803238No Hit
GCCTCTGCTCGGATCTCCCGGTCACGCGAACTAGCCGAGATGACGATCCC137590.12426239803940145No Hit
GCACTCCTGGGGTTGCGTGGGTGGCCTCGGCGATCTTGCGACGCTTCTAG137490.12417208450059819No Hit
CTCTCACCGTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACCACGAC134080.12109239282740711No Hit
CGGGCTCTCACCGTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACCA131050.11835589260166843No Hit
CCTCACGGTACTAATCCGCTATCGGTCATCGAGGAGTATTTAGGCTTACC130140.11753403939855879No Hit
CGACACTTTCTGACTGCCTCTCAGCCGGGTAGCGCTGAGACATATCCTCC128920.11643221422515906No Hit
AGTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACG127750.11537554582116095No Hit
GTATTTAGGCTTACCGGGTGGTCCCGGCGGATTCACAGCGGATTCCACGG126530.11427372064776121No Hit
CCTCAAGGCTTCTCCGTGCGCAGTTCGCTATGCCTCTGCTCGGATCTCCC124000.11198878811603881No Hit
GGGCCTTATCCCACCAAGTGGGTGAGAAACCTGATCTTGGAGAAGGTTTC123070.11114887220516853No Hit
GGGGCCTTATCCCACCAAGTGGGTGAGAAACCTGATCTTGGAGAAGGTTT117170.10582037341577634No Hit
ACCGTCTACGGCAGACCATCCCAGGCCACTTCCGCTAACCACGACACTTT117160.10581134206189603No Hit
GGCCACTTCCGCTAACCACGACACTTTCTGACTGCCTCTCAGCCGGGTAG116200.10494433208938475No Hit
CCCAGTCGCTGTGGTTGTCCCGAGGAGTCCCGCGACCGGACTCATCGGTG112410.10152144896874132No Hit
CCGTGTTCTGCGGGGGGCCTTATCCCACCAAGTGGGTGAGAAACCTGATC112010.10116019481352827No Hit
GGGGTGTGGACGCACGGCTAGCGCCGTGAACGGATGTGGTTGCGAGTTTG111800.10097053638204144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)