13:14:44 [INFO ]  Resuming from step mergeCalling...
13:14:49 [INFO ]  ===> fastq-dump
13:14:49 [INFO ]  ===> ../tools/jdk-13.0.2/bin/java -version
13:14:49 [INFO ]  ===> samtools
13:14:49 [INFO ]  ===> ../tools/qualimap_v2.2.1/qualimap --version
13:14:49 [INFO ]  ===> ../tools/FastQC/fastqc
13:14:50 [INFO ]  ===> ../tools/jdk-13.0.2/bin/java -jar ../tools/snpEff/snpEff.jar -version
13:14:50 [INFO ]  ===> bcftools
13:14:50 [INFO ]  ===> ../tools/jdk-13.0.2/bin/java -jar ../tools/Trimmomatic-0.39/trimmomatic-0.39.jar
13:14:51 [INFO ]  ===> ../tools/REDItools2/env/bin/python2 ../tools/REDItools2/src/cineca/reditools.py
13:14:52 [INFO ]  ===> STAR
13:14:52 [INFO ]  Running step mergeCalling...
13:14:52 [INFO ]  Analyzing calling results from DRR051417 vs influenzaA...