12:53:24 [INFO ]  Resuming from step removeAligned...
12:53:35 [INFO ]  ===> fastq-dump
12:53:35 [INFO ]  ===> ../tools/jdk-13.0.2/bin/java -version
12:53:36 [INFO ]  ===> samtools
12:53:36 [INFO ]  ===> ../tools/qualimap_v2.2.1/qualimap --version
12:53:37 [INFO ]  ===> ../tools/FastQC/fastqc
12:53:38 [INFO ]  ===> ../tools/jdk-13.0.2/bin/java -jar ../tools/snpEff/snpEff.jar -version
12:53:39 [INFO ]  ===> bcftools
12:53:40 [INFO ]  ===> ../tools/jdk-13.0.2/bin/java -jar ../tools/Trimmomatic-0.39/trimmomatic-0.39.jar
12:53:40 [INFO ]  ===> ../tools/REDItools2/env/bin/python2 ../tools/REDItools2/src/cineca/reditools.py
12:53:43 [INFO ]  ===> STAR
12:53:43 [INFO ]  Running step removeAligned...
12:53:43 [INFO ]  ===> Job 96010: samtools view -f 13 -F 256 -bo ../influenzaA/2-alignment/host/bam/Homo_sapiens_GRCh38/DRR051417_star.bam ../influenzaA/2-alignment/host/sam/Homo_sapiens_GRCh38/DRR051417_star.sam && samtools bam2fq ../influenzaA/2-alignment/host/bam/Homo_sapiens_GRCh38/DRR051417_star.bam > ../influenzaA/2-alignment/host/fastq/DRR051417.unmapped.fastq
12:53:43 [ERROR]  Alignment against host for run with ID DRR051423 not found.